PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA168G00010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bZIP
Protein Properties Length: 365aa    MW: 40772.1 Da    PI: 9.3939
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA168G00010genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.6e-105495445
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                  k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  AA168G00010 54 QKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 95
                 5888*************************9877777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.9E-84598No hitNo description
SMARTSM003381.9E-751114IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4385397IPR004827Basic-leucine zipper domain
PfamPF001707.3E-75595IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.47E-75598No hitNo description
PROSITE patternPS0003605873IPR004827Basic-leucine zipper domain
PfamPF141441.4E-32137210IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MADTSSRTDV STDGDTDHRD LGANSGFIYI QSERGHLLAV ASDSSERSKD KMDQKTLRRL  60
AQNREAARKS RLRKKAYVQQ LENSRLKLTQ LEQELQRARQ QGVFISSSGD QAHSTGGNGA  120
LAFDAEHSRW LEEKNRQMNE LRSALNAHAG DAELRIIVDG VMVHYEELFR IKSNAAKNDV  180
FHLLSGMWKT PAERCFLWLG GFRSSELLKV SKLFTNSCVV VEPNNLTLMV TILRQLLANQ  240
LEPMTERQLI GINSLQQTSQ QAEDALSQGM ESLQQSLADT LSSGTLGSSS SDNVASYMGQ  300
MAMAMGKLGT LEGFIRQADN LRLQTLQQML RVLTTRQSAR ALLAIHDYSS RLRALSSLWL  360
ARPRE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013731743.10.0PREDICTED: transcription factor TGA6-like isoform X1
SwissprotQ391400.0TGA6_ARATH; Transcription factor TGA6
TrEMBLA1A6J50.0A1A6J5_ARATH; At3g12250
STRINGAT3G12250.40.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.20.0TGACG motif-binding factor 6